Wiki » History » Version 18
Ilian Atanassov, 02/26/2015 01:36 PM
1 | 1 | Ilian Atanassov | h1. Worm - RBP samples |
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2 | 1 | Ilian Atanassov | |
3 | 16 | Ilian Atanassov | Desired amounts: |
4 | 16 | Ilian Atanassov | * 100 ug protein amount for digestion |
5 | 16 | Ilian Atanassov | * 8-10 ug peptide amount for LC-MS/MS analysis |
6 | 16 | Ilian Atanassov | |
7 | 1 | Ilian Atanassov | "X" indicates that the substance was added, "NA" that no information is available. |
8 | 1 | Ilian Atanassov | |
9 | 17 | Ilian Atanassov | The excess columns show how much sample material was not used for analysis and is in a -80deg freezer. |
10 | 17 | Ilian Atanassov | |
11 | 18 | Ilian Atanassov | The "Protein concentration [ug/ul]" shows the protein concentration in the aliquot from the sample preparation (also RNA measurement would be done on them) |
12 | 18 | Ilian Atanassov | |
13 | 1 | Ilian Atanassov | h2. N2 |
14 | 1 | Ilian Atanassov | |
15 | 16 | Ilian Atanassov | |*Sample name*|*Worm culture*|*Protein concentration [ug/ul]*|*prepared by*|*RBP isolation date*|*Biological replicate*|*Is negative control*|*RBP protein yield [ug]*|*RBP protein excess[ug]*|*RBP peptide yield [ug]*|*RBP peptide excess [ug]*|*MS samples*|*MS analysis date*|*Technical replicates*|*4SU*|*XL*|*DMSO*|*Notes*| |
16 | 16 | Ilian Atanassov | |NA|850 T|NA|Zisong|07/2014|1|No|NA|NA|4.6|NA|140729Li_QX1_Chang_N2_1400ng_01.raw |
17 | 14 | Ilian Atanassov | 140729Li_QX1_Chang_N2_1400ng_02.raw |
18 | 14 | Ilian Atanassov | 140729Li_QX1_Chang_N2_1400ng_03.raw|30/07/2014|3|X|X|NA|| |
19 | 16 | Ilian Atanassov | |1a|500 T|2|Puneet,Roman,Ilian|22/01/2015|1|No|2000|1700|32|20|NA|NA|NA|X|X||| |
20 | 16 | Ilian Atanassov | |1b|200 T|2|Puneet,Roman,Ilian|22/01/2015|1|No|900|720|26|13|NA|NA|NA|X|X||| |
21 | 16 | Ilian Atanassov | |1c|100 T|1|Puneet,Roman,Ilian|22/01/2015|1|No|300|180|16|6|NA|NA|NA|X|X||| |
22 | 16 | Ilian Atanassov | |1d|50 T|0.6|Puneet,Roman,Ilian|22/01/2015|1|No|100|0|17|7|NA|NA|NA|X|X||| |
23 | 16 | Ilian Atanassov | |2|500 T|2|Puneet,Roman,Ilian|22/01/2015|1|Yes|2000|1800|36|23|NA|NA|NA||X|X|| |
24 | 16 | Ilian Atanassov | |3|200 T|2|Puneet,Roman,Ilian|22/01/2015|1|Yes|850|680|18|7|NA|NA|NA|X||NA|vhl-1 mutant| |
25 | 6 | Ilian Atanassov | |
26 | 6 | Ilian Atanassov | |
27 | 13 | Ilian Atanassov | h2. P6662 |
28 | 13 | Ilian Atanassov | |
29 | 16 | Ilian Atanassov | |*Sample name*|*Worm culture*|*Protein concentration [ug/ul]*|*prepared by*|*RBP isolation date*|*Biological replicate*|*Is negative control*|*RBP protein yield [ug]*|*RBP protein excess[ug]*|*RBP peptide yield [ug]*|*RBP peptide excess [ug]*|*MS samples name*|*MS analysis date*|*Technical replicates*|*4SU*|*XL*|*DMSO*|*Notes*| |
30 | 16 | Ilian Atanassov | |NA|650 T|NA|Zisong|07/2014|1|No|NA|NA|4.2|NA|140729Li_QX1_Chang_PS6662_1250ng_01.raw |
31 | 1 | Ilian Atanassov | 140729Li_QX1_Chang_PS6662_1250ng_02.raw |
32 | 1 | Ilian Atanassov | 140729Li_QX1_Chang_PS6662_1250ng_03.raw|31/07/2014|3|X|X|NA|| |