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Mouse Data

RNA-seq

File Experiment perf. by Description experiment
180_C20_sorted.bam R. Mueller Whole Kidney, control, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
181_C21_sorted.bam R. Mueller Whole Kidney, control, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
182_C22_sorted.bam R. Mueller Whole Kidney, control, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
183_C23_sorted.bam R. Mueller Whole Kidney, control, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
184_C24_sorted.bam R. Mueller Whole Kidney, control, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
185_HP10_sorted.bam R. Mueller Whole Kidney, hypoxic preconditioning, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
186_HP11_sorted.bam R. Mueller Whole Kidney, hypoxic preconditioning, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
187_HP12_sorted.bam R. Mueller Whole Kidney, hypoxic preconditioning, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
188_HP13_sorted.bam R. Mueller Whole Kidney, hypoxic preconditioning, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
189_HP14_sorted.bam R. Mueller Whole Kidney, hypoxic preconditioning, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
190_CR2Wo1_sorted.bam R. Mueller Whole Kidney, CR 2 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
191_CR2Wo2_sorted.bam R. Mueller Whole Kidney, CR 2 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
192_CR2Wo3_sorted.bam R. Mueller Whole Kidney, CR 2 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
193_CR2Wo4_sorted.bam R. Mueller Whole Kidney, CR 2 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
194_CR2Wo5_sorted.bam R. Mueller Whole Kidney, CR 2 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
195_CR2Wo6_sorted.bam R. Mueller Whole Kidney, CR 2 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
196_CR4Wo1_sorted.bam R. Mueller Whole Kidney, CR 4 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
197_CR4Wo2_sorted.bam R. Mueller Whole Kidney, CR 4 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
198_CR4Wo3_sorted.bam R. Mueller Whole Kidney, CR 4 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
199_CR4Wo4_sorted.bam R. Mueller Whole Kidney, CR 4 weeks, polyA-Illumina, analyzed by P. Frommolt preconditioning_basal
SN7640108_4757_C20_1_sequence.fq R. Mueller raw data of 180_C20_sorted.bam preconditioning_basal
SN7640108_4757_C20_2_sequence.fq R. Mueller raw data of 180_C20_sorted.bam preconditioning_basal
SN7640108_4758_C21_1_sequence.fq R. Mueller raw data of 181_C21_sorted.bam preconditioning_basal
SN7640108_4758_C21_2_sequence.fq R. Mueller raw data of 181_C21_sorted.bam preconditioning_basal
SN7640108_4759_C22_1_sequence.fq R. Mueller raw data of 182_C22_sorted.bam preconditioning_basal
SN7640108_4759_C22_2_sequence.fq R. Mueller raw data of 182_C22_sorted.bam preconditioning_basal
SN7640108_4760_C23_1_sequence.fq R. Mueller raw data of 183_C23_sorted.bam preconditioning_basal
SN7640108_4760_C23_2_sequence.fq R. Mueller raw data of 183_C23_sorted.bam preconditioning_basal
SN7640108_4761_C24_1_sequence.fq R. Mueller raw data of 184_C24_sorted.bam preconditioning_basal
SN7640108_4761_C24_2_sequence.fq R. Mueller raw data of 184_C24_sorted.bam preconditioning_basal
SN7640108_4752_HP10_1_sequence.fq R. Mueller raw data of 185_HP10_sorted.bam preconditioning_basal
SN7640108_4752_HP10_2_sequence.fq R. Mueller raw data of 185_HP10_sorted.bam preconditioning_basal
SN7640108_4753_HP11_1_sequence.fq R. Mueller raw data of 186_HP11_sorted.bam preconditioning_basal
SN7640108_4753_HP11_2_sequence.fq R. Mueller raw data of 186_HP11_sorted.bam preconditioning_basal
SN7640108_4754_HP12_1_sequence.fq R. Mueller raw data of 187_HP12_sorted.bam preconditioning_basal
SN7640108_4754_HP12_2_sequence.fq R. Mueller raw data of 187_HP12_sorted.bam preconditioning_basal
SN7640108_4755_HP13_1_sequence.fq R. Mueller raw data of 188_HP13_sorted.bam preconditioning_basal
SN7640108_4755_HP13_2_sequence.fq R. Mueller raw data of 188_HP13_sorted.bam preconditioning_basal
SN7640108_4756_HP14_1_sequence.fq R. Mueller raw data of 189_HP14_sorted.bam preconditioning_basal
SN7640108_4756_HP14_2_sequence.fq R. Mueller raw data of 189_HP14_sorted.bam preconditioning_basal
SN7640108_4773_CR2Wo1_1_sequence.fq R. Mueller raw data of 190_CR2Wo1_sorted.bam preconditioning_basal
SN7640108_4773_CR2Wo1_2_sequence.fq R. Mueller raw data of 190_CR2Wo1_sorted.bam preconditioning_basal
SN7640108_4774_CR2Wo2_1_sequence.fq R. Mueller raw data of 191_CR2Wo2_sorted.bam preconditioning_basal
SN7640108_4774_CR2Wo2_2_sequence.fq R. Mueller raw data of 191_CR2Wo2_sorted.bam preconditioning_basal
SN7640108_4775_CR2Wo3_1_sequence.fq R. Mueller raw data of 192_CR2Wo3_sorted.bam preconditioning_basal
SN7640108_4775_CR2Wo3_2_sequence.fq R. Mueller raw data of 192_CR2Wo3_sorted.bam preconditioning_basal
SN7640108_4776_CR2Wo4_1_sequence.fq R. Mueller raw data of 193_CR2Wo4_sorted.bam preconditioning_basal
SN7640108_4776_CR2Wo4_2_sequence.fq R. Mueller raw data of 193_CR2Wo4_sorted.bam preconditioning_basal
SN7640108_4777_CR2Wo5_1_sequence.fq R. Mueller raw data of 194_CR2Wo5_sorted.bam preconditioning_basal
SN7640108_4777_CR2Wo5_2_sequence.fq R. Mueller raw data of 194_CR2Wo5_sorted.bam preconditioning_basal
SN7640108_4778_CR2Wo6_1_sequence.fq R. Mueller raw data of 195_CR2Wo6_sorted.bam preconditioning_basal
SN7640108_4778_CR2Wo6_2_sequence.fq R. Mueller raw data of 195_CR2Wo6_sorted.bam preconditioning_basal
SN7640108_4779_CR4Wo1_1_sequence.fq R. Mueller raw data of 196_CR4Wo1_sorted.bam preconditioning_basal
SN7640108_4779_CR4Wo1_2_sequence.fq R. Mueller raw data of 196_CR4Wo1_sorted.bam preconditioning_basal
SN7640108_4780_CR4Wo2_1_sequence.fq R. Mueller raw data of 197_CR4Wo2_sorted.bam preconditioning_basal
SN7640108_4780_CR4Wo2_2_sequence.fq R. Mueller raw data of 197_CR4Wo2_sorted.bam, cave: this file may be corrupt, if this is the case P. Frommolt can provide the original preconditioning_basal
SN7640108_4781_CR4Wo3_1_sequence.fq R. Mueller raw data of 198_CR4Wo3_sorted.bam preconditioning_basal
SN7640108_4781_CR4Wo3_2_sequence.fq R. Mueller raw data of 198_CR4Wo3_sorted.bam preconditioning_basal
SN7640108_4782_CR4Wo4_1_sequence.fq R. Mueller raw data of 199_CR4Wo4_sorted.bam preconditioning_basal
SN7640108_4782_CR4Wo4_2_sequence.fq R. Mueller raw data of 199_CR4Wo4_sorted.bam preconditioning_basal
SN7640245_19750_CR416_1_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19750_CR416_2_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19751_CR414_1_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19751_CR414_2_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19752_CR415_1_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19752_CR415_2_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19753_HPC16_1_sequence.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19753_HPC16_2_sequence.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19754_HPC22_1_sequence.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19754_HPC22_2_sequence.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19755_HPC24_1_sequence.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19755_HPC24_2_sequence.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19769_HP20_1_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19769_HP20_2_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19770_HP21_1_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19770_HP21_2_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19771_HP23_1_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19771_HP23_2_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19772_CR433_1_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19772_CR433_2_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19773_CR436_1_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19773_CR436_2_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19774_CR437_1_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19774_CR437_2_sequence.fq R. Mueller 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19788_CRKo36_1_sequence.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19788_CRKo36_2_sequence.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19789_CRKo40_1_sequence.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19789_CRKo40_2_sequence.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19790_CRKo41_1_sequence.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19790_CRKo41_2_sequence.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19791_HP37_1_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19791_HP37_2_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19792_HP38_1_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19792_HP38_2_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19793_HP40_1_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640245_19793_HP40_2_sequence.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, ribozero Illumina preconditioning_recovery
SN7640244_19807_CR4Wo1_1_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19807_CR4Wo1_2_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19808_CR4Wo2_1_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19808_CR4Wo2_2_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19809_CR4Wo3_1_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19809_CR4Wo3_2_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19810_CR4Wo4_1_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19810_CR4Wo4_2_sequence.fq R. Mueller 4 weeks CR, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19811_HP10_1_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19811_HP10_2_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19812_HP11_1_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_19812_HP11_2_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20081_HP12_1_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20081_HP12_2_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20082_HP14_1_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20082_HP14_2_sequence.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20083_C20_1_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20083_C20_2_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20084_C22_1_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20084_C22_2_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20085_C23_1_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20085_C23_2_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20086_C24_1_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640244_20086_C24_2_sequence.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, ribozero Illumina (this sample was additionally sequenced using a polyA-selected library) preconditioning_basal
SN7640229_17784_wt14w9_1_sequence.fq R. Mueller whole kidney from untreated 14 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17784_wt14w9_2_sequence.fq R. Mueller whole kidney from untreated 14 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17785_wt14w10_1_sequence.fq R. Mueller whole kidney from untreated 14 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17785_wt14w10_2_sequence.fq R. Mueller whole kidney from untreated 14 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17786_wt14w11_1_sequence.fq R. Mueller whole kidney from untreated 14 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17786_wt14w11_2_sequence.fq R. Mueller whole kidney from untreated 14 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17787_wt96w17_1_sequence.fq R. Mueller whole kidney from untreated 96 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17787_wt96w17_2_sequence.fq R. Mueller whole kidney from untreated 96 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17788_wt96w18_1_sequence.fq R. Mueller whole kidney from untreated 96 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17788_wt96w18_2_sequence.fq R. Mueller whole kidney from untreated 96 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17789_wt96w19_1_sequence.fq R. Mueller whole kidney from untreated 96 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney
SN7640229_17789_wt96w19_2_sequence.fq R. Mueller whole kidney from untreated 96 week old C57Bl6 mouse, same sample as in Affymetrix array data aging_kidney

Micro-RNA

File Experiment perf. by Description experiment
miRNAlist_glomeruli.xls R. Mueller miRNA TLDAs corresponding to samples on Affy arrays, analyzed by R. Mueller and P. Frommolt aging_gloms
miRNA_expression_kidney.csv R. Mueller miRNA TLDAs corresponding to samples on Affy arrays, analyzed by R. Mueller and P. Frommolt aging_kidney
C20_S9_all.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 180_C20_sorted.bam preconditioning_basal
C22_S10_all.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 182_C22_sorted.bam preconditioning_basal
C23_S11_all.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 183_C23_sorted.bam preconditioning_basal
C24_12_all.fq R. Mueller control, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 184_C24_sorted.bam preconditioning_basal
CR4Wo1_S1_all.fq R. Mueller CR 4 weeks, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 196_CR4Wo1_sorted.bam preconditioning_basal
CR4Wo2_S2_all.fq R. Mueller CR 4 weeks, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 197_CR4Wo2_sorted.bam preconditioning_basal
CR4Wo3_S3_all.fq R. Mueller cave: sample looks a little off in PCA, might have to be omitted!, CR 4 weeks, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 198_CR4Wo3_sorted.bam preconditioning_basal
CR4Wo4_S4_all.fq R. Mueller CR 4 weeks, right kidney prepared before ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 199_CR4Wo4_sorted.bam preconditioning_basal
CR4_14_S2_all.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib preconditioning_recovery
CR4_15_S3_all.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib preconditioning_recovery
CR4_16_S1_all.fq R. Mueller 4 weeks CR, left kidney prepared 24 hours after ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib preconditioning_recovery
CR4_33_S10_all.fq R. Mueller 4 weeks CR, 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib preconditioning_recovery
CR4_36_S11_all.fq R. Mueller 4 weeks CR, 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib preconditioning_recovery
CR4_37_S12_all.fq R. Mueller 4 weeks CR, 4 weeks CR, left kidney prepared 4 hours after ischemia-reperfusion damage, CCG, miSEQ, smallRNA lib preconditioning_recovery
CRKo36_S13_all.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage CCG, miSEQ, smallRNA lib preconditioning_recovery
CRKo40_S14_all.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage CCG, miSEQ, smallRNA lib preconditioning_recovery
CRKo41_S15_all.fq R. Mueller control, left kidney prepared 4 hours after ischemia-reperfusion damage CCG, miSEQ, smallRNA lib preconditioning_recovery
HP10_S5_all.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 185_HP10_sorted.bam preconditioning_basal
HP11_S6_all.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 186_HP11_sorted.bam preconditioning_basal
HP12_S7_all.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 187_HP12_sorted.bam preconditioning_basal
HP14_S8_all.fq R. Mueller hypoxic preconditioning, right kidney prepared before ischemia-reperfusion damage, miSEQ, smallRNA lib, same sample as in already uploaded polyA-selected mRNAseq file 189_HP14_sorted.bam preconditioning_basal
HP20_S7_all.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HP21_S8_all.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HP23_S9_all.fq R. Mueller hypoxic preconditioning, left kidney prepared 24 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HP37_S16_all.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HP38_S17_all.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HP40_S18_all.fq R. Mueller hypoxic preconditioning, left kidney prepared 4 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HPC16_S4_all.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HPC22_S5_all.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery
HPC24_S6_all.fq R. Mueller control, left kidney prepared 24 hours after ischemia-reperfusion damage, miSEQ, smallRNA lib preconditioning_recovery

ChIP-seq

File Experiment perf. by Description
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Proteomics

File Experiment perf. by Description
expl.tab name bla bla

Affymetrix microarray

File Experiment perf. by Description experiment
GSM1055749_CBE_NEP__5_160710_MoGene.CEL R. Mueller glomeruli, WT, 4wks, see PMID:23947592 aging_gloms
GSM1055750_CBE_NEP__6_160710_MoGene.CEL R. Mueller glomeruli, WT, 4wks, see PMID:23947592 aging_gloms
GSM1055751_CBE_NEP__8_020211_MoGene.CEL R. Mueller glomeruli, WT, 4wks, see PMID:23947592 aging_gloms
GSM1055752_CBE_NEP__13_020211_MoGene.CEL R. Mueller glomeruli, WT, 14wks, see PMID:23947592 aging_gloms
GSM1055753_CBE_NEP__14_020211_MoGene.CEL R. Mueller glomeruli, WT, 14wks, see PMID:23947592 aging_gloms
GSM1055754_CBE_NEP__15_020211_MoGene.CEL R. Mueller glomeruli, WT, 14wks, see PMID:23947592 aging_gloms
GSM1055755_CBE_NEP__16_020211_MoGene.CEL R. Mueller glomeruli, WT, 14wks, see PMID:23947592 aging_gloms
GSM1055756_CBE_NEP__23_020211_MoGene.CEL R. Mueller glomeruli, WT, 96wks, see PMID:23947592 aging_gloms
GSM1055757_CBE_NEP__24_020211_MoGene.CEL R. Mueller glomeruli, WT, 96wks, see PMID:23947592 aging_gloms
GSM1055758_CBE_NEP__25_020211_MoGene.CEL R. Mueller glomeruli, WT, 96wks, see PMID:23947592 aging_gloms
GSM1055759_CBE_NEP__26_020211_MoGene.CEL R. Mueller glomeruli, WT, 96wks, see PMID:23947592 aging_gloms
GSM1055760_CBE_NEP__27_020211_MoGene.CEL R. Mueller glomeruli, WT, 96wks, see PMID:23947592 aging_gloms
GSM1055761_CBE_NEP__28_020211_MoGene.CEL R. Mueller glomeruli, WT, 96wks, see PMID:23947592 aging_gloms
GSM1055762_CBE_NEP__33_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 4wks, see PMID:23947592 aging_gloms
GSM1055763_CBE_NEP__34_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 4wks, see PMID:23947592 aging_gloms
GSM1055764_CBE_NEP__35_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 4wks, see PMID:23947592 aging_gloms
GSM1055765_CBE_NEP__36_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 4wks, see PMID:23947592 aging_gloms
GSM1055766_CBE_NEP__41_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 14wks, see PMID:23947592 aging_gloms
GSM1055767_CBE_NEP__42_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 14wks, see PMID:23947592 aging_gloms
GSM1055768_CBE_NEP__43_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 14wks, see PMID:23947592 aging_gloms
GSM1055769_CBE_NEP__44_160710_MoGene.CEL R. Mueller glomeruli, Ercc1, 14wks, see PMID:23947592 aging_gloms
CBE_NEP_#1_150710_MoGene.CEL R. Mueller whole kidney, WT female, 4wks, unpublished aging_kidney
CBE_NEP_#2_150710_MoGene.CEL R. Mueller whole kidney, WT female, 4wks, unpublished aging_kidney
CBE_NEP_#3_150710_MoGene.CEL R. Mueller whole kidney, WT female, 4wks, unpublished aging_kidney
CBE_NEP_#4_150710_MoGene.CEL R. Mueller whole kidney, WT female, 4wks, unpublished aging_kidney
CBE_NEP_#9_150710_MoGene.CEL R. Mueller whole kidney, WT female, 14wks, unpublished aging_kidney
CBE_NEP_#10_150710_MoGene.CEL R. Mueller whole kidney, WT female, 14wks, unpublished aging_kidney
CBE_NEP_#11_150710_MoGene.CEL R. Mueller whole kidney, WT female, 14wks, unpublished aging_kidney
CBE_NEP_#12_150710_MoGene.CEL R. Mueller whole kidney, WT female, 14wks, unpublished aging_kidney
CBE_NEP_#17_160710_MoGene.CEL R. Mueller whole kidney, WT female, 96wks, unpublished aging_kidney
CBE_NEP_#18_160710_MoGene.CEL R. Mueller whole kidney, WT female, 96wks, unpublished aging_kidney
CBE_NEP_#19_160710_MoGene.CEL R. Mueller whole kidney, WT female, 96wks, unpublished aging_kidney
CBE_NEP_#20_160710_MoGene.CEL R. Mueller whole kidney, WT female, 96wks, unpublished aging_kidney
CBE_NEP_#21_200710_MoGene.CEL R. Mueller whole kidney, WT female, 96wks, unpublished aging_kidney
CBE_NEP_#22_160710_MoGene.CEL R. Mueller whole kidney, WT female, 96wks, unpublished aging_kidney
CBE_NEP_#29_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 4wks, unpublished aging_kidney
CBE_NEP_#30_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 4wks, unpublished aging_kidney
CBE_NEP_#31_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 4wks, unpublished aging_kidney
CBE_NEP_#32_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 4wks, unpublished aging_kidney
CBE_NEP_#37_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 14wks, unpublished aging_kidney
CBE_NEP_#38_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 14wks, unpublished aging_kidney
CBE_NEP_#39_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 14wks, unpublished aging_kidney
CBE_NEP_#40_160710_MoGene.CEL R. Mueller whole kidney, Ercc1 female, 14wks, unpublished aging_kidney
CBE_SCHE2_356_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 ad libitum, 16wks, unpublished CR_gloms
CBE_SCHE2_858_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 ad libitum, 16wks, unpublished CR_gloms
CBE_SCHE2_861_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 ad libitum, 16wks, unpublished CR_gloms
CBE_SCHE2_862_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 ad libitum, 16wks, unpublished CR_gloms
CBE_SCHE2_415_011112_MoGene.CEL R. Mueller glomeruli, WT ad libitum, 20wks, unpublished CR_gloms
CBE_SCHE2_416_011112_MoGene.CEL R. Mueller glomeruli, WT ad libitum, 20wks, unpublished CR_gloms
CBE_SCHE2_417_011112_MoGene.CEL R. Mueller glomeruli, WT ad libitum, 20wks, unpublished CR_gloms
CBE_SCHE2_388_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 16wks, unpublished CR_gloms
CBE_SCHE2_395_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 16wks, unpublished CR_gloms
CBE_SCHE2_396_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 16wks, unpublished CR_gloms
CBE_SCHE2_394_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 16wks, unpublished CR_gloms
CBE_SCHE2_606_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 30wks, unpublished CR_gloms
CBE_SCHE2_610_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 30wks, unpublished CR_gloms
CBE_SCHE2_614_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 30wks, unpublished CR_gloms
CBE_SCHE2_615_011112_MoGene.CEL R. Mueller glomeruli, Ercc1 CR, 30wks, unpublished CR_gloms
CBE_SCHE2_435_011112_MoGene.CEL R. Mueller glomeruli, WT CR, 20wks, unpublished CR_gloms
CBE_SCHE2_436_011112_MoGene.CEL R. Mueller glomeruli, WT CR, 20wks, unpublished CR_gloms
CBE_SCHE2_437_011112_MoGene.CEL R. Mueller glomeruli, WT CR, 20wks, unpublished CR_gloms
CBE_SCHE2_438_011112_MoGene.CEL R. Mueller glomeruli, WT CR, 20wks, unpublished CR_gloms